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@DCAN-Labs

Developmental Cognition and Neuroimaging Labs

Our lab uses MRI to examine typical and atypical brain development. Our research is examining children with ASD as well as children and adults with ADHD.

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  1. BWAS BWAS Public

    Code to run Brain Wide Association Studies to derive PolyNeuro Risk Scores

    MATLAB 3 1

  2. biceps biceps Public

    Brain Imaging Connectivity Extraction Program Solution

    C

  3. BIBSnet BIBSnet Public

    This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model. It can easily be included in other processing pipelines and for circ…

    Python 4 8

  4. CABINET CABINET Public

    CABINET is a utility that standardizes subsequent container execution. Emphasizing reproducibility, users can share JSONs to exactly replicate how containerized processes follow each other.

    Python 1 1

  5. abcd-hcp-pipeline abcd-hcp-pipeline Public

    bids application for processing functional MRI data, robust to scanner, acquisition and age variability.

    Python 50 19

  6. infant-abcd-bids-pipeline infant-abcd-bids-pipeline Public

    Human infant pipeline, based on abcd-hcp-pipeline, to process fMRI data.

    Python 8 4

Repositories

Showing 10 of 127 repositories
  • cdni-brain Public

    readthedocs for CDNI collaborators and members

    DCAN-Labs/cdni-brain’s past year of commit activity
    3 2 20 2 Updated Oct 23, 2024
  • abcd-dicom2bids Public

    For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.

    DCAN-Labs/abcd-dicom2bids’s past year of commit activity
    Python 19 BSD-3-Clause 20 3 1 Updated Oct 23, 2024
  • DCAN-Labs/hbcdsequences’s past year of commit activity
    0 0 0 0 Updated Oct 23, 2024
  • DCAN-Labs/hbcd-docs’s past year of commit activity
    0 0 9 0 Updated Oct 23, 2024
  • loes-scoring-2 Public

    Code for automated Loes scoring.

    DCAN-Labs/loes-scoring-2’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Oct 22, 2024
  • monai Public

    MONAI code used by CDNI

    DCAN-Labs/monai’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Oct 21, 2024
  • HBCD-MADE Public

    HBCD branch of the MADE pipeline for EEG preprocessing

    DCAN-Labs/HBCD-MADE’s past year of commit activity
    MATLAB 2 3 0 1 Updated Oct 21, 2024
  • abcd-hcp-pipeline Public

    bids application for processing functional MRI data, robust to scanner, acquisition and age variability.

    DCAN-Labs/abcd-hcp-pipeline’s past year of commit activity
    Python 50 BSD-3-Clause 19 8 1 Updated Oct 19, 2024
  • Seg-Model-Creation-GUI Public

    A user interface for nNUnet model training

    DCAN-Labs/Seg-Model-Creation-GUI’s past year of commit activity
    Python 0 BSD-2-Clause 1 0 0 Updated Oct 18, 2024
  • dcan-nn-unet Public

    Utility programs created for using nn-UNet on ABCD data.

    DCAN-Labs/dcan-nn-unet’s past year of commit activity
    Python 2 BSD-3-Clause 1 0 0 Updated Oct 18, 2024

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