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@AllenNeuralDynamics

Allen Institute for Neural Dynamics

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  1. aind-data-schema aind-data-schema Public

    A library that defines AIND data schema and validates JSON.

    Python 23 16

  2. aind-ephys-spikesort-kilosort25-full aind-ephys-spikesort-kilosort25-full Public

    CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.

    Python 11 3

  3. parallax parallax Public

    GUI control software for the Modular Insertion System (MIS)

    Python 5 1

  4. TigerASI TigerASI Public

    a lightweight python interface for ASI brand Tiger Controllers

    Python 5 2

  5. dynamic-foraging-task dynamic-foraging-task Public

    Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control

    Python 5 4

  6. exa-spim-hardware exa-spim-hardware Public

    5

Repositories

Showing 10 of 259 repositories
  • parallax Public

    GUI control software for the Modular Insertion System (MIS)

    AllenNeuralDynamics/parallax’s past year of commit activity
    Python 5 MIT 1 0 2 Updated Oct 14, 2024
  • aind-metadata-viz Public

    Website for public metadata visualization

    AllenNeuralDynamics/aind-metadata-viz’s past year of commit activity
    Python 0 MIT 0 3 0 Updated Oct 14, 2024
  • FORCEB-kv-refstacks-Cellpose Public
    AllenNeuralDynamics/FORCEB-kv-refstacks-Cellpose’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 14, 2024
  • aind-session Public

    User-friendly tools for accessing paths, metadata and assets related to AIND sessions

    AllenNeuralDynamics/aind-session’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Oct 14, 2024
  • aind-smartspim-data-transformation Public

    Data transformations applied to the SmartSPIM data before uploading to the cloud storage service.

    AllenNeuralDynamics/aind-smartspim-data-transformation’s past year of commit activity
    Python 0 MIT 0 1 1 Updated Oct 14, 2024
  • dynamic-foraging-task Public

    Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control

    AllenNeuralDynamics/dynamic-foraging-task’s past year of commit activity
    Python 5 MIT 4 92 (2 issues need help) 2 Updated Oct 14, 2024
  • Aind.Behavior.Services Public
    AllenNeuralDynamics/Aind.Behavior.Services’s past year of commit activity
    C# 0 MIT 0 11 (1 issue needs help) 2 Updated Oct 14, 2024
  • voxel Public

    General purpose microscope control repository

    AllenNeuralDynamics/voxel’s past year of commit activity
    Python 4 MIT 2 14 2 Updated Oct 14, 2024
  • aind-qc-portal Public

    Quality control portal

    AllenNeuralDynamics/aind-qc-portal’s past year of commit activity
    Python 0 MIT 0 5 0 Updated Oct 14, 2024
  • aind-units-nwb Public

    Code Ocean capsule to export ephys units data to NWB

    AllenNeuralDynamics/aind-units-nwb’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Oct 14, 2024
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