test: add oBDS batch test

samply · Jul 2, 2024 · 3af0a4f · 3af0a4f
1 parent b67fcd8
commit 3af0a4f
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Showing 2 changed files with 46 additions and 2 deletions.
diff --git a/src/test/java/de/samply/obds2fhir/Obds2fhirTests.java b/src/test/java/de/samply/obds2fhir/Obds2fhirTests.java
@@ -50,22 +50,30 @@ public void compareErrorPatient () throws IOException {
     }
     @Test
     @Order(4)
-    public void compareBatch () throws IOException {
+    public void compareBatchADT () throws IOException {
         String filename = DigestUtils.sha256Hex("testpatient-ADT-1"+System.getenv().getOrDefault("SALT","")).substring(48);
         String result = "tmp/FHIR_Patients/FHIR_batch_Patient_"+filename+"_ADT_1.xml";
         String expected = "FHIR_batch_ADT_Expected-File-1.xml";
         assertTrue(compare(result, expected));
     }
     @Test
     @Order(5)
+    public void compareBatchOBDS () throws IOException {
+        String filename = DigestUtils.sha256Hex("testpatient-oBDS-1"+System.getenv().getOrDefault("SALT","")).substring(48);
+        String result = "tmp/FHIR_Patients/FHIR_batch_Patient_"+filename+"_oBDS_4.xml";
+        String expected = "FHIR_batch_oBDS_Expected-File-1.xml";
+        assertTrue(compare(result, expected));
+    }
+    @Test
+    @Order(6)
     public void comparePatientSyntheticADT () throws IOException {
         String filename = DigestUtils.sha256Hex("testpatient-ADT-3"+System.getenv().getOrDefault("SALT","")).substring(48);
         String result = "tmp/FHIR_Patients/FHIR_Patient_"+filename+"_ADT_3.xml";
         String expected = "FHIR_ADT_Expected-File-3.xml";
         assertTrue(compare(result, expected));
     }
     @Test
-    @Order(6)
+    @Order(7)
     public void comparePatientSyntheticOBDS () throws IOException {
         String filename = DigestUtils.sha256Hex("testpatient-oBDS-1"+System.getenv().getOrDefault("SALT","")).substring(48);
         String result = "tmp/FHIR_Patients/FHIR_Patient_"+filename+"_oBDS_4.xml";

diff --git a/src/test/resources/FHIR_batch_oBDS_Expected-File-1.xml b/src/test/resources/FHIR_batch_oBDS_Expected-File-1.xml
@@ -0,0 +1,36 @@
+<Bundle xmlns="http://hl7.org/fhir" xmlns:hash="java:de.samply.obds2fhir">
+   <id value="1302b6d11c5b628d"/>
+   <type value="batch"/>
+   <entry>
+      <fullUrl value="http://example.com/Observation/vital1302b6d11c5b628d"/>
+      <resource>
+         <Observation>
+            <id value="vital1302b6d11c5b628d"/>
+            <meta>
+               <profile value="http://dktk.dkfz.de/fhir/StructureDefinition/onco-core-Observation-Vitalstatus"/>
+            </meta>
+            <status value="registered"/>
+            <code>
+               <coding>
+                  <system value="http://loinc.org"/>
+                  <code value="75186-7"/>
+               </coding>
+            </code>
+            <subject>
+               <reference value="Patient/1302b6d11c5b628d"/>
+            </subject>
+            <effectiveDateTime value="2024-07-20"/>
+            <valueCodeableConcept>
+               <coding>
+                  <system value="http://dktk.dkfz.de/fhir/onco/core/CodeSystem/VitalstatusCS"/>
+                  <code value="verstorben"/>
+               </coding>
+            </valueCodeableConcept>
+         </Observation>
+      </resource>
+      <request>
+         <method value="PUT"/>
+         <url value="Observation/vital1302b6d11c5b628d"/>
+      </request>
+   </entry>
+</Bundle>