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Fix CRAN Issues, fix #71 #176

Fix CRAN Issues, fix #71

Fix CRAN Issues, fix #71 #176

on:
push:
pull_request:
name: build_singularity
jobs:
build_singularity:
runs-on: ubuntu-latest
timeout-minutes: 30
strategy:
matrix:
singularity_version:
- '3.8.1'
container:
image: quay.io/singularity/singularity:v${{ matrix.singularity_version }}
options: --privileged
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v4
- name: Show singularity version
run: singularity version
- name: Build container
run: ./scripts/build_singularity_container.sh
- name: Test container, must detect BEAST2
run: singularity test beastier.sif
- name: Show help of container
run: singularity run-help beastier.sif
- name: Run container
run: ./scripts/run_container.sh