First public version

javicarron · Sep 14, 2022 · 92c1095 · 92c1095
1 parent 5d8c546
commit 92c1095
Show file tree

Hide file tree

Showing 11 changed files with 150 additions and 32 deletions.
diff --git a/.gitignore b/.gitignore
@@ -0,0 +1,15 @@
+
+.ipynb_checkpoints/*
+
+pynkowski/__pycache__/
+pynkowski/data/__pycache__/
+pynkowski/theory/__pycache__/
+pynkowski/data/__pycache__/__init__.cpython-39.pyc
+pynkowski/pynkowski.egg-info/
+sphinx/
+dist/
+.ipynb_checkpoints/
+Pynkowski_test.ipynb
+
+*.kate-swp
+*.pyc
diff --git a/docs/pynkowski.html b/docs/pynkowski.html
@@ -44,7 +44,9 @@ <h2>Contents</h2>
   <li><a href="#welcome-to-pynkowskis-documentation">Welcome to Pynkowski's documentation!</a>
   <ul>
     <li><a href="#installation">Installation</a></li>
+    <li><a href="#documentation">Documentation</a></li>
     <li><a href="#example-notebooks">Example notebooks</a></li>
+    <li><a href="#authors">Authors</a></li>
   </ul></li>
 </ul>
 
@@ -90,6 +92,8 @@ <h1 class="modulename">
 
 <p>...and more to come, feel free to contact us (by <a href="mailto:javier.carron@roma2.infn.it">email</a> or opening an issue) to implement more theoretical expectations.</p>
 
+<p>The repository can be found on <a href="https://github.com/javicarron/pynkowski">https://github.com/javicarron/pynkowski</a>.</p>
+
 <h2 id="installation">Installation</h2>
 
 <p>This package can be installed with: </p>
@@ -106,12 +110,20 @@ <h2 id="installation">Installation</h2>
 <li><a href="https://github.com/tqdm/tqdm">tqdm</a> (optional, notebook only)</li>
 </ul>
 
+<h2 id="documentation">Documentation</h2>
+
+<p>The documentation can be found on <a href="https://javicarron.github.io/pynkowski&quot;&gt;https://javicarron.github.io/pynkowski](https://javicarron.github.io/pynkowski&lt;/a&gt;"><a href="https://javicarron.github.io/pynkowski</a></p>
+
 <h2 id="example-notebooks">Example notebooks</h2>
 
 <ul>
 <li>Get the Minkowski Functionals of a CMB temperature $T$ map and compare with theory.</li>
 <li>Get the Minkowski Functionals of a CMB polarization $P^2=Q^2+U^2$ map and compare with theory.</li>
 </ul>
+
+<h2 id="authors">Authors</h2>
+
+<p>This package has been developed by <a href="https:&lt;a href=&quot;www.javiercarron.com&quot;&gt;www.javiercarron.com&lt;/a&gt;">Javier Carrón Duque</a> and Alessandro Carones.</p>
 </div>
 
                         <input id="pynkowski-view-source" class="view-source-toggle-state" type="checkbox" aria-hidden="true" tabindex="-1">
@@ -134,38 +146,48 @@ <h2 id="example-notebooks">Example notebooks</h2>
 </span><span id="L-14"><a href="#L-14"><span class="linenos">14</span></a>
 </span><span id="L-15"><a href="#L-15"><span class="linenos">15</span></a><span class="sd">...and more to come, feel free to contact us (by [email](mailto:javier.carron@roma2.infn.it) or opening an issue) to implement more theoretical expectations.</span>
 </span><span id="L-16"><a href="#L-16"><span class="linenos">16</span></a>
-</span><span id="L-17"><a href="#L-17"><span class="linenos">17</span></a><span class="sd">## Installation</span>
+</span><span id="L-17"><a href="#L-17"><span class="linenos">17</span></a><span class="sd">The repository can be found on [https://github.com/javicarron/pynkowski](https://github.com/javicarron/pynkowski).</span>
 </span><span id="L-18"><a href="#L-18"><span class="linenos">18</span></a>
-</span><span id="L-19"><a href="#L-19"><span class="linenos">19</span></a><span class="sd">This package can be installed with: </span>
-</span><span id="L-20"><a href="#L-20"><span class="linenos">20</span></a><span class="sd">```</span>
-</span><span id="L-21"><a href="#L-21"><span class="linenos">21</span></a><span class="sd">pip install pynkowski</span>
+</span><span id="L-19"><a href="#L-19"><span class="linenos">19</span></a><span class="sd">## Installation</span>
+</span><span id="L-20"><a href="#L-20"><span class="linenos">20</span></a>
+</span><span id="L-21"><a href="#L-21"><span class="linenos">21</span></a><span class="sd">This package can be installed with: </span>
 </span><span id="L-22"><a href="#L-22"><span class="linenos">22</span></a><span class="sd">```</span>
-</span><span id="L-23"><a href="#L-23"><span class="linenos">23</span></a>
-</span><span id="L-24"><a href="#L-24"><span class="linenos">24</span></a><span class="sd">The dependencies are:</span>
-</span><span id="L-25"><a href="#L-25"><span class="linenos">25</span></a><span class="sd">- [numpy](https://numpy.org/)</span>
-</span><span id="L-26"><a href="#L-26"><span class="linenos">26</span></a><span class="sd">- [scipy](https://scipy.org/)</span>
-</span><span id="L-27"><a href="#L-27"><span class="linenos">27</span></a><span class="sd">- [healpy](https://healpy.readthedocs.io/)</span>
-</span><span id="L-28"><a href="#L-28"><span class="linenos">28</span></a><span class="sd">- [tqdm](https://github.com/tqdm/tqdm) (optional, notebook only)</span>
-</span><span id="L-29"><a href="#L-29"><span class="linenos">29</span></a>
-</span><span id="L-30"><a href="#L-30"><span class="linenos">30</span></a>
-</span><span id="L-31"><a href="#L-31"><span class="linenos">31</span></a><span class="sd">## Example notebooks</span>
-</span><span id="L-32"><a href="#L-32"><span class="linenos">32</span></a>
-</span><span id="L-33"><a href="#L-33"><span class="linenos">33</span></a><span class="sd">- Get the Minkowski Functionals of a CMB temperature $T$ map and compare with theory.</span>
-</span><span id="L-34"><a href="#L-34"><span class="linenos">34</span></a><span class="sd">- Get the Minkowski Functionals of a CMB polarization $P^2=Q^2+U^2$ map and compare with theory.</span>
-</span><span id="L-35"><a href="#L-35"><span class="linenos">35</span></a><span class="sd">&#39;&#39;&#39;</span>
-</span><span id="L-36"><a href="#L-36"><span class="linenos">36</span></a>
-</span><span id="L-37"><a href="#L-37"><span class="linenos">37</span></a><span class="kn">from</span> <span class="nn">.data</span> <span class="kn">import</span> <span class="n">Scalar</span>
-</span><span id="L-38"><a href="#L-38"><span class="linenos">38</span></a>
-</span><span id="L-39"><a href="#L-39"><span class="linenos">39</span></a><span class="kn">from</span> <span class="nn">.theory</span> <span class="kn">import</span> <span class="p">(</span><span class="n">get_μ</span><span class="p">,</span>
-</span><span id="L-40"><a href="#L-40"><span class="linenos">40</span></a>                     <span class="n">TheoryTemperature</span><span class="p">,</span>
-</span><span id="L-41"><a href="#L-41"><span class="linenos">41</span></a>                     <span class="n">TheoryP2</span><span class="p">)</span>
-</span><span id="L-42"><a href="#L-42"><span class="linenos">42</span></a>
-</span><span id="L-43"><a href="#L-43"><span class="linenos">43</span></a><span class="kn">from</span> <span class="nn">.__version</span> <span class="kn">import</span> <span class="n">__version__</span>
-</span><span id="L-44"><a href="#L-44"><span class="linenos">44</span></a>
-</span><span id="L-45"><a href="#L-45"><span class="linenos">45</span></a>
+</span><span id="L-23"><a href="#L-23"><span class="linenos">23</span></a><span class="sd">pip install pynkowski</span>
+</span><span id="L-24"><a href="#L-24"><span class="linenos">24</span></a><span class="sd">```</span>
+</span><span id="L-25"><a href="#L-25"><span class="linenos">25</span></a>
+</span><span id="L-26"><a href="#L-26"><span class="linenos">26</span></a><span class="sd">The dependencies are:</span>
+</span><span id="L-27"><a href="#L-27"><span class="linenos">27</span></a><span class="sd">- [numpy](https://numpy.org/)</span>
+</span><span id="L-28"><a href="#L-28"><span class="linenos">28</span></a><span class="sd">- [scipy](https://scipy.org/)</span>
+</span><span id="L-29"><a href="#L-29"><span class="linenos">29</span></a><span class="sd">- [healpy](https://healpy.readthedocs.io/)</span>
+</span><span id="L-30"><a href="#L-30"><span class="linenos">30</span></a><span class="sd">- [tqdm](https://github.com/tqdm/tqdm) (optional, notebook only)</span>
+</span><span id="L-31"><a href="#L-31"><span class="linenos">31</span></a>
+</span><span id="L-32"><a href="#L-32"><span class="linenos">32</span></a><span class="sd">## Documentation</span>
+</span><span id="L-33"><a href="#L-33"><span class="linenos">33</span></a>
+</span><span id="L-34"><a href="#L-34"><span class="linenos">34</span></a><span class="sd">The documentation can be found on [https://javicarron.github.io/pynkowski](https://javicarron.github.io/pynkowski)</span>
+</span><span id="L-35"><a href="#L-35"><span class="linenos">35</span></a>
+</span><span id="L-36"><a href="#L-36"><span class="linenos">36</span></a><span class="sd">## Example notebooks</span>
+</span><span id="L-37"><a href="#L-37"><span class="linenos">37</span></a>
+</span><span id="L-38"><a href="#L-38"><span class="linenos">38</span></a><span class="sd">- Get the Minkowski Functionals of a CMB temperature $T$ map and compare with theory.</span>
+</span><span id="L-39"><a href="#L-39"><span class="linenos">39</span></a><span class="sd">- Get the Minkowski Functionals of a CMB polarization $P^2=Q^2+U^2$ map and compare with theory.</span>
+</span><span id="L-40"><a href="#L-40"><span class="linenos">40</span></a>
+</span><span id="L-41"><a href="#L-41"><span class="linenos">41</span></a>
+</span><span id="L-42"><a href="#L-42"><span class="linenos">42</span></a><span class="sd">## Authors</span>
+</span><span id="L-43"><a href="#L-43"><span class="linenos">43</span></a>
+</span><span id="L-44"><a href="#L-44"><span class="linenos">44</span></a><span class="sd">This package has been developed by [Javier Carrón Duque](https:www.javiercarron.com) and Alessandro Carones.</span>
+</span><span id="L-45"><a href="#L-45"><span class="linenos">45</span></a><span class="sd">&#39;&#39;&#39;</span>
 </span><span id="L-46"><a href="#L-46"><span class="linenos">46</span></a>
-</span><span id="L-47"><a href="#L-47"><span class="linenos">47</span></a>
-</span><span id="L-48"><a href="#L-48"><span class="linenos">48</span></a><span class="n">__docformat__</span> <span class="o">=</span> <span class="s2">&quot;numpy&quot;</span>
+</span><span id="L-47"><a href="#L-47"><span class="linenos">47</span></a><span class="kn">from</span> <span class="nn">.data</span> <span class="kn">import</span> <span class="n">Scalar</span>
+</span><span id="L-48"><a href="#L-48"><span class="linenos">48</span></a>
+</span><span id="L-49"><a href="#L-49"><span class="linenos">49</span></a><span class="kn">from</span> <span class="nn">.theory</span> <span class="kn">import</span> <span class="p">(</span><span class="n">get_μ</span><span class="p">,</span>
+</span><span id="L-50"><a href="#L-50"><span class="linenos">50</span></a>                     <span class="n">TheoryTemperature</span><span class="p">,</span>
+</span><span id="L-51"><a href="#L-51"><span class="linenos">51</span></a>                     <span class="n">TheoryP2</span><span class="p">)</span>
+</span><span id="L-52"><a href="#L-52"><span class="linenos">52</span></a>
+</span><span id="L-53"><a href="#L-53"><span class="linenos">53</span></a><span class="kn">from</span> <span class="nn">.__version</span> <span class="kn">import</span> <span class="n">__version__</span>
+</span><span id="L-54"><a href="#L-54"><span class="linenos">54</span></a>
+</span><span id="L-55"><a href="#L-55"><span class="linenos">55</span></a>
+</span><span id="L-56"><a href="#L-56"><span class="linenos">56</span></a>
+</span><span id="L-57"><a href="#L-57"><span class="linenos">57</span></a>
+</span><span id="L-58"><a href="#L-58"><span class="linenos">58</span></a><span class="n">__docformat__</span> <span class="o">=</span> <span class="s2">&quot;numpy&quot;</span>
 </span></pre></div>
 
 

diff --git a/docs/pynkowski/__version.html b/docs/pynkowski/__version.html
@@ -65,7 +65,7 @@ <h1 class="modulename">
 
                         <label class="view-source-button" for="__version-view-source"><span>View Source</span></label>
 
-                        <div class="pdoc-code codehilite"><pre><span></span><span id="L-1"><a href="#L-1"><span class="linenos">1</span></a><span class="n">__version__</span><span class="o">=</span><span class="s1">&#39;0.2.0&#39;</span>
+                        <div class="pdoc-code codehilite"><pre><span></span><span id="L-1"><a href="#L-1"><span class="linenos">1</span></a><span class="n">__version__</span><span class="o">=</span><span class="s1">&#39;0.2.1&#39;</span>
 </span><span id="L-2"><a href="#L-2"><span class="linenos">2</span></a> 
 </span></pre></div>
 

diff --git a/docs/search.js b/docs/search.js
diff --git a/pynkowski.egg-info/PKG-INFO b/pynkowski.egg-info/PKG-INFO
@@ -0,0 +1,14 @@
+Metadata-Version: 2.1
+Name: pynkowski
+Version: 0.2.1
+Summary: A Python package to compute Minkowski Functionals of input fields, as well as their expected values in the case of Gaussian isotropic fields.
+Home-page: https://github.com/javicarron/pynkowski
+Author: Carrón Duque, Javier and Carones, Alessando
+Author-email: javier.carron@roma2.infn.it
+License: GNU General Public License v3.0
+Keywords: minkowski-functionals,non-gaussian,spherical,anisotropy,healpy,polarization,minkowski,cmb,healpix,curvature,cosmology,gaussian,maps,topology
+Platform: UNKNOWN
+License-File: LICENSE
+
+UNKNOWN
+
diff --git a/pynkowski.egg-info/SOURCES.txt b/pynkowski.egg-info/SOURCES.txt
@@ -0,0 +1,38 @@
+LICENSE
+README.md
+logo.png
+setup.py
+docs/index.html
+docs/pynkowski.html
+docs/search.js
+docs/pynkowski/__version.html
+docs/pynkowski/data.html
+docs/pynkowski/theory.html
+docs/pynkowski/data/bak_data.html
+docs/pynkowski/data/scalar.html
+docs/pynkowski/data/utils.html
+docs/pynkowski/theory/bak_theory.html
+docs/pynkowski/theory/p2.html
+docs/pynkowski/theory/temperature.html
+docs/pynkowski/theory/utils.html
+pynkowski/__init__.py
+pynkowski/__version.py
+pynkowski.egg-info/PKG-INFO
+pynkowski.egg-info/SOURCES.txt
+pynkowski.egg-info/dependency_links.txt
+pynkowski.egg-info/requires.txt
+pynkowski.egg-info/top_level.txt
+pynkowski/data/__init__.py
+pynkowski/data/scalar.py
+pynkowski/data/utils.py
+pynkowski/data/__pycache__/__init__.cpython-39.pyc
+pynkowski/data/__pycache__/scalar.cpython-39.pyc
+pynkowski/data/__pycache__/utils.cpython-39.pyc
+pynkowski/theory/__init__.py
+pynkowski/theory/p2.py
+pynkowski/theory/temperature.py
+pynkowski/theory/utils.py
+pynkowski/theory/__pycache__/__init__.cpython-39.pyc
+pynkowski/theory/__pycache__/p2.cpython-39.pyc
+pynkowski/theory/__pycache__/temperature.cpython-39.pyc
+pynkowski/theory/__pycache__/utils.cpython-39.pyc
diff --git a/pynkowski.egg-info/dependency_links.txt b/pynkowski.egg-info/dependency_links.txt
@@ -0,0 +1 @@
+
diff --git a/pynkowski.egg-info/requires.txt b/pynkowski.egg-info/requires.txt
@@ -0,0 +1,3 @@
+numpy
+scipy
+healpy
diff --git a/pynkowski.egg-info/top_level.txt b/pynkowski.egg-info/top_level.txt
@@ -0,0 +1 @@
+pynkowski
diff --git a/pynkowski/__version.py b/pynkowski/__version.py
@@ -1,2 +1,2 @@
-__version__='0.2.0'
+__version__='0.2.1'
 
diff --git a/setup.py b/setup.py
@@ -0,0 +1,24 @@
+
+from setuptools import setup, find_namespace_packages
+from pynkowski.__version import __version__
+
+
+setup(
+    name='pynkowski',
+    version=__version__,
+    description='A Python package to compute Minkowski Functionals of input fields, as well as their expected values in the case of Gaussian isotropic fields.',
+    license='GNU General Public License v3.0',
+    license_files=['LICENSE'],
+    author="Carrón Duque, Javier and Carones, Alessando",
+    author_email='javier.carron@roma2.infn.it',
+    packages=['pynkowski','pynkowski.data','pynkowski.theory'],
+    package_dir={"pynkowski": "pynkowski"},
+    url='https://github.com/javicarron/pynkowski',
+    keywords='minkowski-functionals,non-gaussian,spherical,anisotropy,healpy,polarization,minkowski,cmb,healpix,curvature,cosmology,gaussian,maps,topology',
+    install_requires=[
+          'numpy',
+          'scipy',
+          'healpy'
+      ],
+
+)