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ferhatalkan committed Mar 15, 2021
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### Ribo-seq focused (O)ligo (D)esign pipeline to (D)eplete (R)ibosomal RNA fragments

###### v0.9 , peer review release
###### v1.0 , Publicationm Release
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The software consists of two parts, ''**_Ribo-ODDR_**'' and ''**_Ribo-ODDR_:**_oligo-selector_''
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#### How to run "_**Ribo-ODDR: oligo-selector**_"
It is provided as an R script, which you can open in RStudio and run easily if you have the packages installed. The Shiny app self-contains the Instructions on how to navigate yourself through the app.

#### Publication link
If you use _Ribo-ODDR_ to optimize your Ribo-seq experiments, do not forget to cite our publication below.
[Ferhat Alkan, Joana Silva, Eric Pintó Barberà, William J Faller, Ribo-ODDR: Oligo design pipeline for experiment-specific rRNA depletion in ribo-seq, Bioinformatics, 2021, btab171.](https://doi.org/10.1093/bioinformatics/btab171)

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Ribo-ODDR was created by [Faller Lab]()
Ribo-ODDR was created by [Faller Lab](https://www.fallerlab.com/)

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