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@PennLINC

Lifespan Informatics and Neuroimaging Center

The Lifespan Informatics and Neuroimaging Center at the University of Pennylvannia

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  1. qsiprep qsiprep Public

    Preprocessing of diffusion MRI

    Python 139 56

  2. qsirecon qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    Python 3 2

  3. xcp_d xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    Python 75 24

  4. aslprep aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    Python 37 15

  5. CuBIDS CuBIDS Public

    Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

    Python 19 9

  6. babs babs Public

    BIDS App Bootstrap (BABS)

    Python 5 5

Repositories

Showing 10 of 174 repositories
  • thalamocortical_development Public

    https://pennlinc.github.io/thalamocortical_development/

    PennLINC/thalamocortical_development’s past year of commit activity
    R 0 1 0 0 Updated Oct 16, 2024
  • xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    PennLINC/xcp_d’s past year of commit activity
    Python 75 BSD-3-Clause 24 40 8 Updated Oct 15, 2024
  • qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    PennLINC/qsirecon’s past year of commit activity
    Python 3 BSD-3-Clause 2 50 0 Updated Oct 15, 2024
  • qsiprep Public

    Preprocessing of diffusion MRI

    PennLINC/qsiprep’s past year of commit activity
    Python 139 BSD-3-Clause 56 98 8 Updated Oct 15, 2024
  • xcpd_build Public

    Builds a base docker image for xcp-d

    PennLINC/xcpd_build’s past year of commit activity
    Dockerfile 2 2 4 0 Updated Oct 15, 2024
  • open-physio-data Public

    Open fMRI datasets with concurrent physio data. Focused on physio measures that correlate with autonomic state.

    PennLINC/open-physio-data’s past year of commit activity
    0 MIT 0 2 0 Updated Oct 15, 2024
  • aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    PennLINC/aslprep’s past year of commit activity
    Python 37 15 36 10 Updated Oct 15, 2024
  • babs Public

    BIDS App Bootstrap (BABS)

    PennLINC/babs’s past year of commit activity
    Python 5 MIT 5 51 4 Updated Oct 14, 2024
  • qsirecon_build Public

    Docker build for QSIRecon

    PennLINC/qsirecon_build’s past year of commit activity
    Dockerfile 0 Apache-2.0 0 0 1 Updated Oct 14, 2024
  • smripost-linc Public

    Aggregate interesting derivatives from sMRIPrep/Freesurfer derivatives

    PennLINC/smripost-linc’s past year of commit activity
    0 BSD-3-Clause 0 6 0 Updated Oct 14, 2024
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