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"RuntimeError: ConnectionPool is closed" when registration #47

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azzhu opened this issue Nov 27, 2023 · 0 comments
Open

"RuntimeError: ConnectionPool is closed" when registration #47

azzhu opened this issue Nov 27, 2023 · 0 comments
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@azzhu
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azzhu commented Nov 27, 2023

Bug report

Description of the problem

Data information:
total 16 tiles
the dimensions of each tile is [1920,1920,1099]
datatype:uint16
the pixel resolution is [0.23,0.23,0.42]
sum size of two rounds is about 1T
each round has four channels "c0,c1,c2,c3"
the dapi channel is "c0"

When I skipped other modules and just run registration, an error had occurred:

Log file(s)

1
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4

Environment

  • EASI-FISH Pipeline version: [dev]
  • Nextflow version: [23.04.1]
  • Container runtime: [Singularity]
  • Platform: [Slurm]
  • Operating system: [CentOS 7.6]

Additional context

(Add any other context about the problem here)

@azzhu azzhu added the bug Something isn't working label Nov 27, 2023
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