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This repository has been archived by the owner on Jul 17, 2023. It is now read-only.

manta-0.27.0

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@ctsa ctsa released this 31 Jul 01:11
· 798 commits to master since this release

This is a new feature release debuting @x-chen's initial implementation of tumor-only analysis.

Changelog:

  • MANTA-188 fix off-by-one position issues in duplication
    and inversion VCF records
    • For duplication VCF records: POS is one less, and END is one more, than previous manta versions
    • For inversion VCF records with breakends opening to the right (with 'INV3' tag): END is one more than previous manta versions
    • For inversion VCF records with breakends opening to the left (with 'INV5' tag): POS is one less than previous manta versions
  • MANTA-229 Add initial support for tumor-only analysis

manta-0.27.0.centos5_x86_64.tar.bz2 is a binary distribution for 64-bit linux. This is built on CentOS 5 with all dependencies except glibc statically linked. It is expected to run without modification on most linux distributions.

The manta-0.27.0.release_src.tar.bz2 download is the full source code release. The “Source code” downloads are generated by GitHub and are incomplete as they are missing version numbers and build system changes to improve portability.