manta-0.12

• MANTA-20 incorporate split-reads into quality score
• MANTA-42 SV finder mismatches various read pair / sv-candidate combinations
• MANTA-53 Enable --rescore option in runWorkflow.py
• MANTA-40 Don't call splicing-events in RNA-seq as deletions
• MANTA-20 include split read counts for short reads
• MANTA-44 Fix Rhodobacter analysis