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This code trains a CNN in Keras to classify cell images (infected/uninfected). It sets up data generators, defines model architecture with convolutional layers, applies regularization, configures callbacks, and trains the model for binary classification.

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HayatiYrtgl/Cell_Classification_CNN

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Explanation of the code line by line:

  1. from keras.layers import *: Imports all layers from the Keras library. This allows you to use any layer without specifying the module.

  2. from keras.models import Sequential: Imports the Sequential model from Keras. Sequential is a linear stack of layers.

  3. from keras.utils import to_categorical: Imports a utility function to convert class vector (integers) to binary class matrix.

  4. import numpy as np: Imports the numpy library with the alias np.

  5. from keras.regularizers import l1: Imports L1 regularization.

  6. from keras.callbacks import EarlyStopping, ModelCheckpoint, TensorBoard: Imports various callbacks used during training.

  7. from keras.preprocessing.image import ImageDataGenerator: Imports the ImageDataGenerator class from Keras for real-time data augmentation.

  8. train_path = "../DATASET/cell_images/train": Specifies the path to the training data directory.

  9. test_path = "../DATASET/cell_images/test": Specifies the path to the test data directory.

  10. train_generator = ImageDataGenerator(...): Creates an ImageDataGenerator object for training data augmentation.

  11. test_generator = ImageDataGenerator(...): Creates an ImageDataGenerator object for test data preprocessing.

  12. train_set = train_generator.flow_from_directory(...): Generates batches of augmented data for training from the specified directory.

  13. test_set = test_generator.flow_from_directory(...): Generates batches of augmented data for testing from the specified directory.

  14. early_stopping = EarlyStopping(...): Defines the early stopping criteria for training.

  15. tensorboard = TensorBoard(...): Configures TensorBoard for visualization during training.

  16. model_checkpoint = ModelCheckpoint(...): Configures model checkpointing to save the best model during training.

  17. callbacks_list = [early_stopping, tensorboard, model_checkpoint]: Creates a list of callbacks to be used during training.

  18. model = Sequential(): Creates a Sequential model.

  19. model.add(Conv2D(...)): Adds a convolutional layer to the model with specified parameters.

  20. model.add(MaxPooling2D(...)): Adds a max pooling layer to the model.

  21. model.add(BatchNormalization()): Adds a batch normalization layer to the model.

  22. model.add(Flatten()): Flattens the input to a one-dimensional array.

  23. model.add(Dense(...)): Adds a fully connected dense layer to the model.

  24. model.summary(): Prints a summary of the model architecture.

  25. model.compile(...): Compiles the model with specified loss function, optimizer, and metrics.

  26. model.fit(...): Trains the model using the training data generator, with specified parameters such as number of epochs, batch size, validation split, and callbacks.

That's a comprehensive overview of what each line of the code does. Let me know if you need further clarification on any specific part!

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This code trains a CNN in Keras to classify cell images (infected/uninfected). It sets up data generators, defines model architecture with convolutional layers, applies regularization, configures callbacks, and trains the model for binary classification.

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