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Releases: yhoogstrate/dr-disco

v0.7.0

17 May 11:39
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  • Changed CLI interface
  • Added dr-disco classify
  • Removed classification step from dr-disco detect such that classification can be done without re-running detect completely.
  • Added blacklist system plus a few known contaminants
  • Fixed broken nose (dependency)
  • Adds some extra variables useful for classification
  • Improved the TP and FP ratio of the filter

v0.6.0

12 Apr 12:14
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  • Changed behavior of pruning: less post-merging steps necessary
  • Added two extra variables that can be used for classification

v0.5.0

06 Apr 12:20
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  • Large improvements in parsing junctions from reads and much better performance on circRNAs

v0.4.0

23 Mar 11:28
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  • Adds column indicating whether a result is likely to be circRNA
  • Adds column with genomic distance between breakpoints

v0.3.5

13 Mar 10:53
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v0.3.4

02 Mar 12:00
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  • Better way of handling stdio / logging for bioconda compatibility

0.3.3

02 Mar 12:09
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  • Huge improvement in performance in extract subnetworks by translating a recursion problem into an iterative linear problem.

0.3.2

03 Feb 10:14
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  • Allows to run dr-disco bam-extract on non 'fixed' BAM-files

0.3.1

01 Feb 11:46
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  • Fix in dr-disco fix code for reads annotated with identical SA-tags

0.3.0

01 Feb 11:29
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Command line interface changes