Releases: yhoogstrate/dr-disco
Releases · yhoogstrate/dr-disco
v0.7.0
- Changed CLI interface
- Added
dr-disco classify
- Removed classification step from
dr-disco detect
such that classification can be done without re-running detect completely. - Added blacklist system plus a few known contaminants
- Fixed broken nose (dependency)
- Adds some extra variables useful for classification
- Improved the TP and FP ratio of the filter
v0.6.0
- Changed behavior of pruning: less post-merging steps necessary
- Added two extra variables that can be used for classification
v0.5.0
- Large improvements in parsing junctions from reads and much better performance on circRNAs
v0.4.0
- Adds column indicating whether a result is likely to be circRNA
- Adds column with genomic distance between breakpoints
v0.3.5
- Using shutil.move over os.rename (http://bugs.python.org/issue14848)
v0.3.4
- Better way of handling stdio / logging for bioconda compatibility
0.3.3
- Huge improvement in performance in
extract subnetworks
by translating a recursion problem into an iterative linear problem.
0.3.2
- Allows to run
dr-disco bam-extract
on non 'fixed' BAM-files
0.3.1
- Fix in
dr-disco fix
code for reads annotated with identical SA-tags
0.3.0
Command line interface changes