Workflow for generating regular LC-MS data from the ones acquired in MRM mode
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Updated
Apr 1, 2017
Workflow for generating regular LC-MS data from the ones acquired in MRM mode
An app for visualizing LC-MS features detected with Optimus workflow
Acquire & filter mass spectral libraries based on sample taxonomy
█ 𝐓𝐇𝐈𝐒 𝐈𝐒 𝐀 𝐌𝐈𝐑𝐑𝐎𝐑 𝐎𝐅 𝐓𝐇𝐄 𝐒𝐀𝐌𝐄 𝐑𝐄𝐏𝐎𝐒𝐈𝐓𝐎𝐑𝐘 𝐎𝐍 𝐁𝐈𝐓𝐁𝐔𝐂𝐊𝐄𝐓 – 𝐓𝐇𝐈𝐒 𝐏𝐀𝐆𝐄 𝐈𝐒 𝐍𝐎𝐓 𝐌𝐎𝐍𝐈𝐓𝐎𝐑𝐄𝐃 – 𝐏𝐋𝐄𝐀𝐒𝐄 𝐒𝐄𝐄 𝐓𝐇𝐄 𝐁𝐈𝐓𝐁𝐔𝐂𝐊𝐄𝐓 𝐏𝐀𝐆𝐄 𝐅𝐎𝐑 𝐓𝐇𝐄 𝐋𝐀𝐓𝐄𝐒𝐓 𝐃𝐄𝐓𝐀𝐈𝐋𝐒
Package for analyzing MS with Python
Optimize XCMS analytical parameters by running IPO workflow (Peak picking + Retention time correction and grouping optimization) on Metabolights studies within the PhenoMeNal EU project.
Workflow for LC-MS feature analysis and spatial mapping
ProbMetab For Galaxy
R package for Multi-isotope Labeling for Metabolomics Analysis
Real-time/post-acquisition untargeted LC-MS pre-processing
Metabolomics Feature Identification Report Industry Standards from BioNovoGene Corporation
R/Bioconductor package - STRUCT report
Mass spectrometry data visualization
The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
LipidHunter is capable to perform bottom up identification of lipids from LC-MS/MS and shotgun lipidomics data by resembling a workflow of manual spectra annotation. LipidHunter generates interactive HTML output with its unique six-panel-image, which provides an easy way to review, store, and share the identification results.
Application for the handling and simplification of putative annotations in untargeted metabolomics analysis based on LC/ESI-MS
epilipidomics tools for Lipostar 2 developed by Team SysMedOs
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