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This repository contains methylation AFLP data as employed in Rodríguez-Casariego et al., Frontiers in Marine Sciences, 2020: "Genome-wide DNA methylation analysis reveals a conserved epigenetic response to seasonal environmental variation in the staghorn coral Acropora cervicornis"
This repository corresponds to the study: Carlot et al. (2022). Scaling up calcification, respiration, and photosynthesis rates of six prominent coral taxa. Ecology and Evolution. https://doi.org/10.1002/ece3.8613
This repository contains code used in the analysis of coral bleaching survey data collected across the Hawaiian Archipelago during the 2019 bleaching event. We investigated spatial, temporal, and taxa-specific variability in bleaching, as well as drivers of the event. See README for more information on downloading archived data.
All code and analyses performed for: Roitman, S., López-Londoño, T., Joseph Pollock, F. et al. Surviving marginalized reefs: assessing the implications of the microbiome on coral physiology and survivorship. Coral Reefs 39, 795–807 (2020).
This repository contains code used to develop an automated bleaching classifier in CoralNet (https://coralnet.ucsd.edu). See README for overview of code, and link to more information on the development of the classifier.