From 4433f4804ec4a2659a0d20eab2fa631da8e25826 Mon Sep 17 00:00:00 2001 From: Eva Hamrud <50098063+evaham1@users.noreply.github.com> Date: Wed, 25 Sep 2024 13:43:43 +1000 Subject: [PATCH] Biocstyle back in suggests description and load it if avaliable for vignette building --- DESCRIPTION | 4 ++-- vignettes/vignette.Rmd | 5 +++++ 2 files changed, 7 insertions(+), 2 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 014462bf..f5c2b94a 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -25,9 +25,9 @@ Imports: ggrepel, BiocParallel, utils, - gsignal, - BiocStyle + gsignal Suggests: + BiocStyle, knitr, rmarkdown, testthat, diff --git a/vignettes/vignette.Rmd b/vignettes/vignette.Rmd index 99838895..6f05cc89 100644 --- a/vignettes/vignette.Rmd +++ b/vignettes/vignette.Rmd @@ -65,6 +65,11 @@ colorize <- function(color, x) { # The libraries to load #install.packages(kableExtra) #library(kableExtra) +if (requireNamespace("BiocStyle", quietly = TRUE)) { + BiocStyle::html_document() +} else { + rmarkdown::html_document() +} ``` ```{r 00-header-generation, echo=FALSE, eval=FALSE}