Java memory issue

[ahorn720]

I think that my directory should have enough memory, im not getting a quota error like previously. Because i thought it was a java memory issue, i even added export _JAVA_OPTIONS="-Xms256M -Xmx728M -XX:ParallelGCThreads=1" to my ~/.bashrc too. But im still getting this error. Previously it would stop at bowtie but now its stopping at the adapter cutting.

Any suggestions?

Thank you!
NBM_15-4stderror.txt
NBM_15-4stdout.txt

[leepc12]

This is a disk space problem. Please check disk space on

1. your working directory where you ran the pipeline command line.
2. your pipeline git directory (/home/$USER usually have small space).
3. temporary directories ($TMP and $TMPDIR).