This tutorial will introduce how to analyze three dimensional stacked and volumetric images in Python, mainly using scikit-image. Here we will learn how to:
- pre-process data using filtering, binarization and segmentation techniques.
- inspect, count and measure attributes of objects and regions of interest in the data.
- visualize 3D data.
Please prepare for the tutorial by installing the pre-requisite software beforehand.
If you could not successfully set up an environment, you may also access the material via MyBinder:
For more info: