From 81ebbf6f918733f547e1bd0ae9e5757e9bea23cd Mon Sep 17 00:00:00 2001 From: Ben Gyori Date: Wed, 19 Jun 2024 22:50:42 -0400 Subject: [PATCH] Curated 14 mappings (ben) --- src/biomappings/resources/incorrect.tsv | 1 + src/biomappings/resources/mappings.tsv | 13 +++++++++++++ src/biomappings/resources/predictions.tsv | 14 -------------- 3 files changed, 14 insertions(+), 14 deletions(-) diff --git a/src/biomappings/resources/incorrect.tsv b/src/biomappings/resources/incorrect.tsv index 664e12dc..7079eaff 100644 --- a/src/biomappings/resources/incorrect.tsv +++ b/src/biomappings/resources/incorrect.tsv @@ -106,6 +106,7 @@ chebi CHEBI:15367 all-trans-retinoic acid skos:exactMatch mesh D012160 Retina se chebi CHEBI:15756 hexadecanoic acid skos:exactMatch mesh D010169 Palmitic Acids semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:LexicalMatching https://github.com/indralab/panacea_indra/blob/master/panacea_indra/make_ctd_tests.py 0.9 chebi CHEBI:15940 nicotinic acid skos:exactMatch mesh D009539 Nicotinic Acids semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:16543 N(2)-acetyl-L-ornithine skos:exactMatch mesh C021951 N(delta)-acetylornithine semapv:ManualMappingCuration orcid:0000-0003-4423-4370 +chebi CHEBI:17221 beta-myrcene skos:exactMatch mesh C509595 myrcene semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:17544 hydrogencarbonate skos:exactMatch mesh D001639 Bicarbonates semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:17883 hydrogen chloride skos:exactMatch mesh D007943 Leukemia, Hairy Cell semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:22927 bromine atom skos:exactMatch mesh D031724 Bromus semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 diff --git a/src/biomappings/resources/mappings.tsv b/src/biomappings/resources/mappings.tsv index f3bf7eac..2a7cf0e6 100644 --- a/src/biomappings/resources/mappings.tsv +++ b/src/biomappings/resources/mappings.tsv @@ -2362,6 +2362,7 @@ chebi CHEBI:27770 nonanoyl-CoA skos:exactMatch mesh C057128 nonanoyl-coenzyme A chebi CHEBI:27777 acetohydroxamic acid skos:exactMatch mesh C006358 acetohydroxamic acid semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:28179 benzamide skos:exactMatch mesh C037689 benzamide semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:28426 cyanidin 3-O-beta-D-glucoside skos:exactMatch mesh C114438 cyanidin 3-O-glucoside semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 +chebi CHEBI:28755 2,4,6-trichlorophenol skos:exactMatch mesh C024564 2,4,6-trichlorophenol semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:28777 liquiritigenin skos:exactMatch mesh C083152 liquiritigenin semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:28792 erucic acid skos:exactMatch mesh C049811 erucic acid semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:28821 piperine skos:exactMatch mesh C008922 piperine semapv:ManualMappingCuration orcid:0000-0001-9439-5346 @@ -2377,6 +2378,7 @@ chebi CHEBI:2968 bacampicillin skos:exactMatch mesh C011674 bacampicillin semapv chebi CHEBI:29688 telithromycin skos:exactMatch mesh C106791 telithromycin semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:2980 5,6,7-trimethoxyflavone skos:exactMatch mesh C107364 5,6,7-trimethoxyflavone semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:30222 neutron skos:exactMatch mesh D009502 Neutrons semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 +chebi CHEBI:30704 molybdenum disulfide skos:exactMatch mesh C082964 molybdenum disulfide semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:30746 benzoic acid skos:exactMatch mesh D019817 Benzoic Acid semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:3078 betamethasone sodium phosphate skos:exactMatch mesh C028994 betamethasone sodium phosphate semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:30805 dodecanoic acid skos:exactMatch mesh C030358 lauric acid semapv:ManualMappingCuration orcid:0000-0003-4423-4370 @@ -2447,6 +2449,7 @@ chebi CHEBI:3353 candoxatril skos:exactMatch mesh C062766 candoxatril semapv:Man chebi CHEBI:3404 carboprost tromethamine skos:exactMatch mesh C062843 carboprost tromethamine semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:34339 3-Hydroxyestra-1,3,5(10),6-tetraen-17-one skos:exactMatch mesh C076348 3-hydroxyestra-1,3,5(10),6-tetraen-17-one semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:34380 monobenzone skos:exactMatch mesh C006429 monobenzone semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +chebi CHEBI:34399 4-Chloronitrobenzene skos:exactMatch mesh C010407 4-chloronitrobenzene semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:34545 Azimilide skos:exactMatch mesh C086123 azimilide semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:34762 Ferric gluconate skos:exactMatch mesh C035552 ferric gluconate semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:3481 cefamandole nafate skos:exactMatch mesh C012810 cefamandole nafate semapv:ManualMappingCuration orcid:0000-0001-9439-5346 @@ -2457,6 +2460,7 @@ chebi CHEBI:34946 Reactive blue 2 skos:exactMatch mesh C012842 Cibacron Blue F 3 chebi CHEBI:34953 Ro 61-8048 skos:exactMatch mesh C110196 Ro 61-8048 semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:34956 ruthenium red skos:exactMatch mesh D012430 Ruthenium Red semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:34973 Selfotel skos:exactMatch mesh C053672 selfotel semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +chebi CHEBI:35028 Trimethylolpropane triacrylate skos:exactMatch mesh C027993 trimethylolpropane triacrylate semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:35036 fentin chloride skos:exactMatch mesh C012594 triphenyltin chloride semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:3504 cefpodoxime skos:exactMatch mesh C053268 cefpodoxime semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:3505 cefpodoxime proxetil skos:exactMatch mesh C053267 cefpodoxime proxetil semapv:ManualMappingCuration orcid:0000-0003-4423-4370 @@ -2573,6 +2577,7 @@ chebi CHEBI:46050 docosane skos:exactMatch mesh C470023 docosane semapv:ManualMa chebi CHEBI:46149 picric acid skos:exactMatch mesh C005858 picric acid semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:46245 coenzyme Q10 skos:exactMatch mesh C024989 coenzyme Q10 semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:46557 zoledronic acid skos:exactMatch mesh D000077211 Zoledronic Acid semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +chebi CHEBI:46643 isobutyl nitrite skos:exactMatch mesh C018086 isobutyl nitrite semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:46742 Nutlin-3 skos:exactMatch mesh C482205 nutlin 3 semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:4682 dolasetron skos:exactMatch mesh C060344 dolasetron semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:469 1'-acetoxychavicol acetate skos:exactMatch mesh C047948 1'-acetoxychavicol acetate semapv:ManualMappingCuration orcid:0000-0001-9439-5346 @@ -2627,6 +2632,7 @@ chebi CHEBI:51451 endothelin receptor antagonist skos:exactMatch mesh D065128 En chebi CHEBI:52221 isothiocyanate skos:exactMatch mesh D017879 Isothiocyanates semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:52233 tin-116 atom skos:exactMatch mesh C000615562 Tin-116 semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:52593 nanowire skos:exactMatch mesh D053770 Nanowires semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 +chebi CHEBI:52633 molybdenum-95 skos:exactMatch mesh C000615511 Molybdenum-95 semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:53078 N(6)-(2,4-dinitrophenyl)lysine skos:exactMatch mesh C007493 epsilon-dinitrophenyllysine semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:53175 13-apo-beta-carotenone skos:exactMatch mesh C071310 beta-apo-13-carotenone semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:53457 glucuronoxylomannan skos:exactMatch mesh C027478 glucuronoxylomannan semapv:ManualMappingCuration orcid:0000-0003-4423-4370 @@ -2774,6 +2780,7 @@ chebi CHEBI:7611 nonacosan-10-ol skos:exactMatch mesh C468854 10-nonacosanol sem chebi CHEBI:76114 benoxaprofen skos:exactMatch mesh C011677 benoxaprofen semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:76274 SC560 skos:exactMatch mesh C115461 SC 560 semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:76308 tetradecanedioic acid skos:exactMatch mesh C441251 1,14-tetradecanedioic acid semapv:ManualMappingCuration orcid:0000-0003-4423-4370 +chebi CHEBI:76601 2-(chloromethyl)pyridine skos:exactMatch mesh C091423 2-chloromethylpyridine semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:76607 macitentan skos:exactMatch mesh C533860 macitentan semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:76617 EC 2.7.10.2 (non-specific protein-tyrosine kinase) inhibitor skos:exactMatch mesh D000075242 Janus Kinase Inhibitors semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:76749 bopindolol skos:exactMatch mesh C036007 bopindolol semapv:ManualMappingCuration orcid:0000-0001-9439-5346 @@ -2824,6 +2831,7 @@ chebi CHEBI:82220 atraton skos:exactMatch mesh C017035 atratone semapv:ManualMap chebi CHEBI:82357 N-Nitrosodiethanolamine skos:exactMatch mesh C014129 N-nitrosodiethanolamine semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:82392 Arsenobetaine skos:exactMatch mesh C038992 arsenobetaine semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:82469 Glycidyl oleate skos:exactMatch mesh C013542 glycidyl oleate semapv:ManualMappingCuration orcid:0000-0003-4423-4370 +chebi CHEBI:82482 Methyl acrylate skos:exactMatch mesh C035956 methyl acrylate semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_chebi_mesh_mappings.py 0.95 chebi CHEBI:8256 Plantamajoside skos:exactMatch mesh C421173 plantamajoside semapv:ManualMappingCuration orcid:0000-0003-4423-4370 chebi CHEBI:82621 monascin skos:exactMatch mesh C517880 monascin semapv:ManualMappingCuration orcid:0000-0001-9439-5346 chebi CHEBI:82699 oritavancin skos:exactMatch mesh C100708 oritavancin semapv:ManualMappingCuration orcid:0000-0001-9439-5346 @@ -4455,6 +4463,7 @@ mesh C019919 CoA-synthesizing protein complex skos:exactMatch go GO:1990143 CoA- mesh C021240 tissue-factor-pathway inhibitor 2 skos:exactMatch ncit C111846 Tissue Factor Pathway Inhibitor 2 semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh C022052 placental ribonuclease inhibitor skos:exactMatch ncit C101604 Ribonuclease Inhibitor semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh C024352 fludarabine skos:exactMatch ncit C1094 Fludarabine semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +mesh C024564 2,4,6-trichlorophenol skos:exactMatch ncit C44304 2,4,6-Trichlorophenol semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95 mesh C025026 sodium sulfite skos:exactMatch ncit C28205 Sodium Sulfite semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh C025462 sulindac sulfide skos:exactMatch ncit C29854 Sulindac Sulfide semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh C026452 messenger ribonucleoprotein skos:exactMatch go GO:1990124 messenger ribonucleoprotein complex semapv:ManualMappingCuration orcid:0000-0003-4423-4370 @@ -7458,6 +7467,7 @@ mesh D008934 Mitogens skos:exactMatch chebi CHEBI:52290 mitogen semapv:ManualMap mesh D008937 Mitomycins skos:exactMatch chebi CHEBI:25357 mitomycin semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh D008942 Mitoxantrone skos:exactMatch chebi CHEBI:50729 mitoxantrone semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh D008976 Molluscum Contagiosum skos:exactMatch hp HP:0032163 Molluscum contagiosum semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_hp_mesh_mappings.py 0.9 +mesh D008982 Molybdenum skos:exactMatch chebi CHEBI:28685 molybdenum atom semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95 mesh D009020 Morphine skos:exactMatch chebi CHEBI:17303 morphine semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh D009026 Mortality skos:exactMatch efo 0004352 mortality semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mesh D009026 Mortality skos:exactMatch ncit C16880 Mortality semapv:ManualMappingCuration orcid:0000-0001-9439-5346 @@ -7742,6 +7752,7 @@ mesh D013405 Suicide skos:exactMatch efo 0007624 suicide semapv:ManualMappingCur mesh D013405 Suicide skos:exactMatch ncit C3394 Suicide semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mesh D013413 Sulfadoxine skos:exactMatch chebi CHEBI:9329 sulfadoxine semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh D013420 Sulfamethoxazole skos:exactMatch chebi CHEBI:9332 sulfamethoxazole semapv:ManualMappingCuration orcid:0000-0003-4423-4370 +mesh D013427 Sulfapyridine skos:exactMatch chebi CHEBI:132842 sulfapyridine semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py 0.95 mesh D013547 Sweating, Gustatory skos:exactMatch hp HP:0025277 Gustatory sweating semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching generate_hp_mesh_mappings.py 0.9 mesh D013550 Swimming skos:exactMatch go GO:0036268 swimming semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mesh D013559 Symbiosis skos:exactMatch go GO:0044403 symbiotic process semapv:ManualMappingCuration orcid:0000-0001-9439-5346 @@ -7851,6 +7862,7 @@ mesh D015530 Nuclear Matrix skos:exactMatch go GO:0016363 nuclear matrix semapv: mesh D015539 Platelet Activation skos:exactMatch go GO:0030168 platelet activation semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mesh D015570 Josamycin skos:exactMatch chebi CHEBI:31739 josamycin semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py 0.95 mesh D015570 Josamycin skos:exactMatch ncit C83851 Josamycin semapv:ManualMappingCuration orcid:0000-0003-4423-4370 semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95 +mesh D015632 1-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine skos:exactMatch chebi CHEBI:17963 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95 mesh D015636 Magnesium Chloride skos:exactMatch chebi CHEBI:6636 magnesium dichloride semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh D015636 Magnesium Chloride skos:exactMatch ncit C29240 Magnesium Chloride semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh D015662 Trimethoprim, Sulfamethoxazole Drug Combination skos:exactMatch chebi CHEBI:3770 co-trimoxazole semapv:ManualMappingCuration orcid:0000-0003-4423-4370 @@ -7858,6 +7870,7 @@ mesh D015715 Corneal Edema skos:exactMatch ncit C50508 Corneal Edema semapv:Manu mesh D015725 Fluconazole skos:exactMatch chebi CHEBI:46081 fluconazole semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh D015735 Mifepristone skos:exactMatch chebi CHEBI:50692 mifepristone semapv:ManualMappingCuration orcid:0000-0003-4423-4370 mesh D015742 Propofol skos:exactMatch chebi CHEBI:44915 propofol semapv:ManualMappingCuration orcid:0000-0001-9439-5346 +mesh D015761 4-Aminopyridine skos:exactMatch chebi CHEBI:34385 4-aminopyridine semapv:ManualMappingCuration orcid:0000-0001-9439-5346 semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95 mesh D015774 Ganciclovir skos:exactMatch chebi CHEBI:465284 ganciclovir semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mesh D015775 Fractures, Stress skos:exactMatch ncit C26779 Stress Fracture semapv:ManualMappingCuration orcid:0000-0001-9439-5346 mesh D015831 Osteochondroma skos:exactMatch efo 1000411 Osteochondroma semapv:ManualMappingCuration orcid:0000-0003-4423-4370 diff --git a/src/biomappings/resources/predictions.tsv b/src/biomappings/resources/predictions.tsv index eb6fa5c2..e063aec9 100644 --- a/src/biomappings/resources/predictions.tsv +++ b/src/biomappings/resources/predictions.tsv @@ -1264,7 +1264,6 @@ chebi CHEBI:172129 Momordicin II skos:exactMatch mesh C000605971 momordicin II s chebi CHEBI:17213 D-lysopine skos:exactMatch mesh C015333 lysopine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:172142 Acetylvalerenolic acid skos:exactMatch mesh C037135 acetylvalerenolic acid semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:17215 methyl L-tyrosinate skos:exactMatch mesh C040444 tyrosine methyl ester semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py -chebi CHEBI:17221 beta-myrcene skos:exactMatch mesh C509595 myrcene semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:17225 salutaridine skos:exactMatch mesh C009270 salutaridine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:17228 taurocyamine skos:exactMatch mesh C009558 taurocyamine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:172315 Norbuprenorphine skos:exactMatch mesh C043585 norbuprenorphine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py @@ -2653,7 +2652,6 @@ chebi CHEBI:28724 9,10-dihydroxyoctadecanoic acid skos:exactMatch mesh C074110 9 chebi CHEBI:28735 4-nitroacetophenone skos:exactMatch mesh C001972 4-nitroacetophenone semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:28740 3,4-Dihydroxymandelonitrile skos:exactMatch mesh C040484 3,4-dihydroxymandelonitrile semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:28747 picolinic acid skos:exactMatch mesh C030614 picolinic acid semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py -chebi CHEBI:28755 2,4,6-trichlorophenol skos:exactMatch mesh C024564 2,4,6-trichlorophenol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:28756 Eutypine skos:exactMatch mesh C102200 eutypine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:28759 3-oxo-3-phenylpropionic acid skos:exactMatch mesh C036323 3-keto-3-phenylpropionic acid semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:28776 gamma-glutamyl-Se-methylselenocysteine skos:exactMatch mesh C424943 glutamyl-Se-methylselenocysteine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py @@ -2885,7 +2883,6 @@ chebi CHEBI:30681 osmocene skos:exactMatch mesh C033842 osmocene semapv:LexicalM chebi CHEBI:30687 osmium atom skos:exactMatch mesh D009992 Osmium semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:3070 Bestatin skos:exactMatch mesh C012211 ubenimex semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:30703 tetrathiomolybdate(2-) skos:exactMatch mesh C020809 tetrathiomolybdate semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py -chebi CHEBI:30704 molybdenum disulfide skos:exactMatch mesh C082964 molybdenum disulfide semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:30725 aflatoxin B1 exo-8,9-epoxide skos:exactMatch mesh C006426 aflatoxin B1-2,3-oxide semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:30729 ethylenediaminetetraacetatoferrate(1-) skos:exactMatch mesh C019179 Fe(III)-EDTA semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:30731 cimetidine S-oxide skos:exactMatch mesh C034042 cimetidine sulfoxide semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py @@ -3464,7 +3461,6 @@ chebi CHEBI:34377 4-(1-benzofuran-2-yl)pyridine skos:exactMatch mesh C050289 4-( chebi CHEBI:34388 4-Bromocatechol skos:exactMatch mesh C040660 4-bromocatechol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:34392 4-Butoxyphenol skos:exactMatch mesh C119273 4-butoxyphenol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:34394 4-Chloro-4'-biphenylol skos:exactMatch mesh C056545 4-chloro-4'-biphenylol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py -chebi CHEBI:34399 4-Chloronitrobenzene skos:exactMatch mesh C010407 4-chloronitrobenzene semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:3440 carvacrol skos:exactMatch mesh C073316 carvacrol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:34401 4-Chlorotoluene skos:exactMatch mesh C029049 4-chlorotoluene semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:34417 4-Hydroxy-2,2',4',6'-tetrachlorobiphenyl skos:exactMatch mesh C000603336 2,2',4',6'-tetrachlorobiphenyl-4-ol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py @@ -3623,7 +3619,6 @@ chebi CHEBI:35021 Trichloroethanol glucuronide skos:exactMatch mesh C405204 tric chebi CHEBI:35022 Trichomycin skos:exactMatch mesh C100192 hachimycin semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:35023 Trichomycin A skos:exactMatch mesh C499929 trichomycin A semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:35024 Trichomycin B skos:exactMatch mesh C499930 trichomycin B semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py -chebi CHEBI:35028 Trimethylolpropane triacrylate skos:exactMatch mesh C027993 trimethylolpropane triacrylate semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:35029 Trimethylolpropane trimethacrylate skos:exactMatch mesh C028643 trimethylolpropane trimethacrylate semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:35034 Triphenylethylene skos:exactMatch mesh C037749 triphenylethylene semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:35037 tris(2-chloroethyl) phosphate skos:exactMatch mesh C031324 tris(chloroethyl)phosphate semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py @@ -4325,7 +4320,6 @@ chebi CHEBI:46502 tungstate skos:exactMatch mesh C045951 tungstate semapv:Lexica chebi CHEBI:46548 zardaverine skos:exactMatch mesh C066436 zardaverine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:46565 4-(2-AMINOETHYL)BENZENESULFONAMIDE skos:exactMatch mesh C097944 4-(2-aminoethyl)benzenesulfonamide semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:46574 wybutosine skos:exactMatch mesh C467591 wybutosine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py -chebi CHEBI:46643 isobutyl nitrite skos:exactMatch mesh C018086 isobutyl nitrite semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:46645 isobutanol skos:exactMatch mesh C040507 isobutyl alcohol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:46660 hydroxypyruvaldehyde skos:exactMatch mesh C017417 hydroxypyruvaldehyde semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:46673 D-arabinosone skos:exactMatch mesh C000266 arabinosone semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py @@ -4843,7 +4837,6 @@ chebi CHEBI:52620 cadmium-113 skos:exactMatch mesh C000615541 Cadmium-113 semapv chebi CHEBI:52621 lithium-6 atom skos:exactMatch mesh C000615209 Lithium-6 semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:52623 iron-57 atom skos:exactMatch mesh C000615381 Iron-57 semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:52626 antimony-123 atom skos:exactMatch mesh C000615566 Antimony-123 semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py -chebi CHEBI:52633 molybdenum-95 skos:exactMatch mesh C000615511 Molybdenum-95 semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:52636 iodine-129 atom skos:exactMatch mesh C000614963 Iodine-129 semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:52637 europium-151 atom skos:exactMatch mesh C000615025 Europium-151 semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:52640 N-acylethanolamine skos:exactMatch mesh C022203 N-acylethanolamines semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py @@ -7488,7 +7481,6 @@ chebi CHEBI:76452 dialuric acid skos:exactMatch mesh C004718 dialuric acid semap chebi CHEBI:76503 monobutyrin skos:exactMatch mesh C063895 1-butyrylglycerol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:76578 diradylglycerol skos:exactMatch mesh C035561 diarachidonyl diglyceride semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:76591 (25R)-cholest-5-ene-3beta,26-diol skos:exactMatch mesh C076996 27-hydroxycholesterol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py -chebi CHEBI:76601 2-(chloromethyl)pyridine skos:exactMatch mesh C091423 2-chloromethylpyridine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:76604 MeIQx skos:exactMatch mesh C036990 2-amino-3,8-dimethylimidazo(4,5-f)quinoxaline semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:76606 methyl carbamate skos:exactMatch mesh C036868 methyl carbamate semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:76611 flutemetamol ((18)F) skos:exactMatch mesh C581552 flutemetamol semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py @@ -8557,7 +8549,6 @@ chebi CHEBI:82475 4-Hydroxyazobenzene skos:exactMatch mesh C524594 4-hydroxyazob chebi CHEBI:82476 Hydroxysenkirkine skos:exactMatch mesh C013570 hydroxysenkirkine semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:82478 Iron sorbitex skos:exactMatch mesh C008170 citric acid, iron, sorbitol drug combination semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:82479 Lauroyl peroxide skos:exactMatch mesh C035089 lauroyl peroxide semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py -chebi CHEBI:82482 Methyl acrylate skos:exactMatch mesh C035956 methyl acrylate semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:82483 5-Methylangelicin skos:exactMatch mesh C023026 5-methylangelicin semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:82486 3-Methylchrysene skos:exactMatch mesh C529617 3-methylchrysene semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py chebi CHEBI:82487 4-Methylchrysene skos:exactMatch mesh C529618 4-methylchrysene semapv:LexicalMatching 0.95 generate_chebi_mesh_mappings.py @@ -14732,7 +14723,6 @@ mesh C024328 APOD protein, human skos:exactMatch uniprot P05090 APOD semapv:Lexi mesh C024348 13-hydroxy-9,11-octadecadienoic acid skos:exactMatch ncit C131741 13-Hydroxyoctadecadienoic Acid semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh C024353 resiniferatoxin skos:exactMatch ncit C1214 Resiniferatoxin semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh C024530 piritrexim skos:exactMatch ncit C1031 Piritrexim semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py -mesh C024564 2,4,6-trichlorophenol skos:exactMatch ncit C44304 2,4,6-Trichlorophenol semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh C024565 ethylene dichloride skos:exactMatch ncit C44383 Ethylene Dichloride semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh C024566 1,1,1-trichloroethane skos:exactMatch ncit C75637 Trichloroethane semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh C024721 1-N-(1,3-dihydroxy-2-propyl)kanamycin B skos:exactMatch ncit C75063 Propikacin semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py @@ -31379,7 +31369,6 @@ mesh D008973 Tenericutes skos:exactMatch ncit C85860 Tenericutes semapv:LexicalM mesh D008979 Moloney murine leukemia virus skos:exactMatch ncit C14241 Moloney Leukemia Virus semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D008980 Moloney murine sarcoma virus skos:exactMatch ncit C14242 Moloney Sarcoma Virus semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D008981 Molsidomine skos:exactMatch chebi CHEBI:31861 Molsidomine semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py -mesh D008982 Molybdenum skos:exactMatch chebi CHEBI:28685 molybdenum atom semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D008983 Molybdoferredoxin skos:exactMatch chebi CHEBI:30409 iron-sulfur-molybdenum cofactor semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D008984 Monaco skos:exactMatch ncit C16874 Monaco semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D008985 Monensin skos:exactMatch chebi CHEBI:27617 monensin A semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py @@ -33501,7 +33490,6 @@ mesh D013423 Sulfamoxole skos:exactMatch chebi CHEBI:55548 sulfamoxole semapv:Le mesh D013425 Sulfanilic Acids skos:exactMatch chebi CHEBI:33557 aminobenzenesulfonic acid semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D013426 Sulfaphenazole skos:exactMatch chebi CHEBI:77780 sulfaphenazole semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py mesh D013426 Sulfaphenazole skos:exactMatch ncit C66569 Sulfaphenazole semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py -mesh D013427 Sulfapyridine skos:exactMatch chebi CHEBI:132842 sulfapyridine semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py mesh D013428 Sulfaquinoxaline skos:exactMatch ncit C76979 Sulfaquinoxaline semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D013431 Sulfates skos:exactMatch chebi CHEBI:24840 inorganic sulfate salt semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D013433 Sulfoglycosphingolipids skos:exactMatch chebi CHEBI:36477 sulfoglycosphingolipid semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py @@ -34585,7 +34573,6 @@ mesh D015618 Histiocytosis, Sinus skos:exactMatch ncit C36075 Sinus Histiocytosi mesh D015622 Epithelioid Cells skos:exactMatch ncit C12559 Epithelioid Cell semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D015624 Lambert-Eaton Myasthenic Syndrome skos:exactMatch ncit C3155 Lambert Eaton Myasthenic Syndrome semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D015625 Tissue Expansion Devices skos:exactMatch ncit C85840 Breast Tissue Expander semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py -mesh D015632 1-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine skos:exactMatch chebi CHEBI:17963 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D015638 Cytochalasin D skos:exactMatch chebi CHEBI:529996 cytochalasin D semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D015642 Radiology, Interventional skos:exactMatch ncit C17952 Interventional Radiology semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D015643 Erythromycin Ethylsuccinate skos:exactMatch chebi CHEBI:31555 Erythromycin ethylsuccinate semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py @@ -34640,7 +34627,6 @@ mesh D015756 Genes, tat skos:exactMatch ncit C16619 TAT Gene semapv:LexicalMatch mesh D015759 Ionomycin skos:exactMatch chebi CHEBI:63954 ionomycin semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py mesh D015759 Ionomycin skos:exactMatch ncit C596 Ionomycin semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D015760 Alfentanil skos:exactMatch chebi CHEBI:2569 alfentanil semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py -mesh D015761 4-Aminopyridine skos:exactMatch chebi CHEBI:34385 4-aminopyridine semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D015763 2-Amino-5-phosphonovalerate skos:exactMatch chebi CHEBI:138644 2-amino-5-phosphonopentanoic acid semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D015764 Bepridil skos:exactMatch chebi CHEBI:3061 bepridil semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py mesh D015765 Almitrine skos:exactMatch chebi CHEBI:53778 almitrine semapv:LexicalMatching 0.95 https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py