Repository for study on PTR across human Tissues (Franks et al. 2016)
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Most of the results and figures can be generated by running the code tissue-ptr.R
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Code for the GO analysis is in analysis.R
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rPTR comparisons between Kim and Wilhelm are evaluted in rptr.r
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Most relevant and necessary data (excluded the "raw" preprocessed data) is in the data/ dir.
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Raw data is available here: https://www.dropbox.com/sh/4nzzqtsoixsh5gm/AAAMtqZ9qU8F1ggyaIM9prqKa?dl=0
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Raw data is normalized using code in preprocess_*.R files