_quarto.yml

lang: en
project:
  type: book
  output-dir: docs
  resources: resources

execute:
  freeze: auto

editor: 
  render-on-save: false

# default knitr options
knitr:
  opts_chunk:
    echo: true
    results: "hold"
    message: false
    warning: true
    error: true
    out-width: '100%'
    fig-path: "images/figures/"

book:
  title: 'Data Skills for Reproducible Research'
  author: "Lisa DeBruine, Dale Barr, Emily Nordmann, Rebecca Lai, David Pharis"
  description: "This book provides an overview of skills needed for reproducible and open research using the statistical programming language R and tidyverse packages. It covers reproducible workflows, data visualisation, data tidying and wrangling, archiving, iteration and functions, probability and data simulations."
  cover-image: images/logos/logo.png
  image: images/logos/logo.png
  favicon: images/logos/favicon.ico
  # cookie-consent: true
  google-analytics: "G-6NP3MF25W3"
  page-navigation: true
  search: true
  # comments:
  #   hypothesis:
  #     theme: clean
  #     openSidebar: false
  repo-url: https://github.com/psyteachr/reprores-v4/
  repo-branch: master
  repo-actions: [edit, issue, source]
  # downloads: [pdf, epub]
  sharing:
  - twitter
  - facebook
  - linkedin
  # sidebar:
  #   style: docked
  #   background: light
  margin-header: "<a href='https://doi.org/10.5281/zenodo.6365077'><img src='https://zenodo.org/badge/DOI/10.5281/zenodo.6365077.svg' alt='DOI'></a>"
  page-footer:
    left: "CC-BY 2024, psyTeachR"
    right:
    - icon: github
      href: https://github.com/psyteachr/reprores-v4
    - icon: https://zenodo.org/badge/DOI/10.5281/zenodo.6527194.svg
      href: https://doi.org/10.5281/zenodo.6527194
  chapters:
  - index.qmd
  - 01-intro.qmd
  - 02-reports.qmd
  - 03-viz.qmd
  - 04-summary.qmd
  - 05-join.qmd
  - 06-tidy.qmd
  - 07-wrangle.qmd
  - 08-func.qmd
  - 09-sim.qmd
  - 10-next.qmd
  - part: "Assessments"
    chapters:
    - assessment-1.qmd
    - assessment-2.qmd
    - assessment-3.qmd
    - assessment-4.qmd
  - 12-license.qmd
  appendices:
  - app-installing-r.qmd
  - app-symbols.qmd
  - app-conventions.qmd
  - app-teams.qmd
  - app-datasets.qmd
#  - app-exercises.qmd
  - app-debugging.qmd
  - app-import.qmd
  - app-datatypes.qmd
  - app-dates.qmd
  - app-styling.qmd
  - app-webpage.qmd

bibliography:
  - include/book.bib
  - include/packages.bib
csl: include/apa.csl

format:
  html:
    theme:
      light:
      - flatly
      - include/light.scss
      dark:
      - darkly
      - include/dark.scss
    css:
    - include/psyteachr.css
    - include/webex.css
    - include/style.css
    df-print: kable
    html-table-processing: none
    link-external-icon: true
    link-external-newwindow: true
    link-external-filter: ^(?:http:|https:)\/\/psyteachr\.github\.io\/reprores-v4
    toc-depth: 3
    toc-expand: 2
    code-link: true
    code-fold: false
    code-line-numbers: true
    code-overflow: wrap
    code-copy: hover
    fig-width: 8
    fig-height: 5
    fig-align: 'center'
    highlight-style: a11y
    crossrefs-hover: false
    # mainfont: ''
    # monofont: ''
    include-after-body:
    - include/webex.js
    - include/script.js