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invalid pointer #4

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pdimens opened this issue Sep 26, 2023 · 0 comments
Open

invalid pointer #4

pdimens opened this issue Sep 26, 2023 · 0 comments

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@pdimens
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pdimens commented Sep 26, 2023 •
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Running haptree-x with seemingly the correct data formats, I'm getting an un-diagnosable core dump error about an invalid pointer. Unsure if this is related to #2 , but my htslib version is 1.18.

$ haptreex -v variants.filtered.vcf -d ZS10-221221-15x.bam -o testrun --10x
HapTree-X v2.0
Ploidy: 2
Loading VCF file variants.filtered.vcf...
730899 SNPs in VCF file
Running DNA/RNA phasing without DASE (no gene data provided)
free(): invalid pointer
Aborted (core dumped)
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@pdimens